- java.lang.Object
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- ij.ImagePlus
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- ij.plugin.DICOM
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- All Implemented Interfaces:
Measurements,PlugIn,java.awt.image.ImageObserver,java.lang.Cloneable
public class DICOM extends ImagePlus implements PlugIn
This plugin decodes DICOM files. If 'arg' is empty, it displays a file open dialog and opens and displays the image selected by the user. If 'arg' is a path, it opens the specified image and the calling routine can display it using "((ImagePlus)IJ.runPlugIn("ij.plugin.DICOM", path)).show()".
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Field Summary
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Fields inherited from class ij.ImagePlus
changes, CLOSED, COLOR_256, COLOR_RGB, compositeImage, currentSlice, dimensionsSet, flattenTitle, GRAY16, GRAY32, GRAY8, height, img, ip, locked, nChannels, nFrames, nSlices, OPENED, roi, SAVED, setIJMenuBar, UPDATED, width, win
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Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH
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Fields inherited from interface ij.measure.Measurements
ADD_TO_OVERLAY, ALL_STATS, AREA, AREA_FRACTION, CENTER_OF_MASS, CENTROID, CIRCULARITY, ELLIPSE, FERET, INTEGRATED_DENSITY, INVERT_Y, KURTOSIS, LABELS, LIMIT, MAX_STANDARDS, MEAN, MEDIAN, MIN_MAX, MODE, NaN_EMPTY_CELLS, PERIMETER, RECT, SCIENTIFIC_NOTATION, SHAPE_DESCRIPTORS, SKEWNESS, SLICE, STACK_POSITION, STD_DEV
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.StringgetInfo(java.lang.String path)Returns the DICOM tags of the specified file as a string.static java.lang.StringgetTagName(java.lang.String id)Returns the name of the specified DICOM tag id.voidopen(java.lang.String path)Opens the specified file as a DICOM.voidrun(java.lang.String arg)This method is called when the plugin is loaded.-
Methods inherited from class ij.ImagePlus
addImageListener, clone, close, convertIndexToPosition, convertToImageProcessor, copy, copy, copyAttributes, copyScale, copyToSystem, createEmptyStack, createHyperStack, createImagePlus, createLut, createNewRoi, createRoiMask, createThresholdMask, crop, crop, crop, crop, cropAndSave, cut, deleteRoi, draw, draw, duplicate, flatten, flattenStack, flush, getAllStatistics, getBitDepth, getBufferedImage, getBytesPerPixel, getC, getCalibration, getCanvas, getChannel, getChannelProcessor, getClipboard, getCompositeMode, getCurrentSlice, getDefault16bitRange, getDimensions, getDimensions, getDisplayMode, getDisplayRangeMax, getDisplayRangeMin, getFileInfo, getFrame, getGlobalCalibration, getHeight, getHideOverlay, getID, getImage, getImageProperties, getImageStack, getImageStackSize, getInfoProperty, getListeners, getLocalCalibration, getLocationAsString, getLuts, getMask, getNChannels, getNDimensions, getNFrames, getNSlices, getNumericProp, getNumericProperty, getOpenAsHyperStack, getOriginalFileInfo, getOverlay, getPixel, getPlot, getProcessor, getProp, getProperties, getPropertiesAsArray, getProperty, getPropsInfo, getRawStatistics, getRoi, getShortTitle, getSizeInBytes, getSlice, getStack, getStackIndex, getStackSize, getStartTime, getStaticGlobalCalibration, getStatistics, getStatistics, getStatistics, getStatistics, getStringProperty, getT, getTitle, getType, getWidth, getWindow, getZ, hide, imageUpdate, isComposite, isDisplayedHyperStack, isHyperStack, isInvertedLut, isLocked, isLockedByAnotherThread, isProcessor, isRGB, isStack, isThreshold, isVisible, killRoi, killStack, lock, lockSilently, logImageListeners, mouseMoved, notifyListeners, okToDeleteRoi, paste, paste, paste, plotHistogram, plotHistogram, removeImageListener, repaintWindow, resetClipboard, resetDisplayRange, resetRoi, resetStack, resize, resize, restoreRoi, revert, saveRoi, setActivated, setActiveChannels, setAntialiasRendering, setBorderColor, setC, setCalibration, setColor, setDeactivated, setDefault16bitRange, setDefaultDisplayRange, setDimensions, setDisplayMode, setDisplayRange, setDisplayRange, setFileInfo, setGlobalCalibration, setHideOverlay, setIgnoreFlush, setIgnoreGlobalCalibration, setIJMenuBar, setIJMenuBar, setImage, setImage, setLut, setOpenAsHyperStack, setOverlay, setOverlay, setOverlay, setPlot, setPosition, setPosition, setPositionWithoutUpdate, setProcessor, setProcessor, setProp, setProp, setProperties, setProperty, setRoi, setRoi, setRoi, setRoi, setSlice, setSliceWithoutUpdate, setStack, setStack, setStack, setT, setTemporary, setTitle, setType, setTypeToColor256, setWindow, setZ, show, show, startTiming, tempOverlay, toString, trimProcessor, unlock, updateAndDraw, updateAndRepaintWindow, updateChannelAndDraw, updateImage, updatePosition, updateStatusbarValue, updateVirtualSlice, waitTillActivated, windowActivated
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Constructor Detail
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DICOM
public DICOM()
Default constructor.
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DICOM
public DICOM(java.io.InputStream is)
Constructs a DICOM reader that using an InputStream. Here is an example that shows how to open and display a DICOM:DICOM dcm = new DICOM(is); dcm.run("Name"); dcm.show();
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DICOM
public DICOM(java.io.BufferedInputStream bis)
Constructs a DICOM reader that using an BufferredInputStream.
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Method Detail
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run
public void run(java.lang.String arg)
Description copied from interface:PlugInThis method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt.
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open
public void open(java.lang.String path)
Opens the specified file as a DICOM. Does not display a message if there is an error. Here is an example:DICOM dcm = new DICOM(); dcm.open(path); if (dcm.getWidth()==0) IJ.log("Error opening '"+path+"'"); else dcm.show();
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getInfo
public java.lang.String getInfo(java.lang.String path)
Returns the DICOM tags of the specified file as a string.
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getTagName
public static java.lang.String getTagName(java.lang.String id)
Returns the name of the specified DICOM tag id.
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