Uses of Interface

Packages that use PlugIn 
Package Description
  • Uses of PlugIn in ij.gui

    Classes in ij.gui that implement PlugIn 
    Modifier and Type Class Description
    class  RoiDefaultsDialog
    This plugin implements the Edit/Options/Roi Defaults command.
  • Uses of PlugIn in ij.plugin

    Classes in ij.plugin that implement PlugIn 
    Modifier and Type Class Description
    class  AboutBox
    This plugin implements the Help/About ImageJ command by opening about.jpg in ij.jar, scaling it 600% and adding text to an overlay.
    class  Animator
    This plugin animates stacks.
    class  AppearanceOptions
    This plugin implements the Edit/Options/Appearance command.
    class  ArrowToolOptions
    This plugin implements the Edit/Options/Arrow Tool command.
    class  AVI_Reader
    ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame) Restrictions and Notes: - Only few formats supported: - uncompressed 8 bit with palette (=LUT) - uncompressed 8 & 16 bit grayscale - uncompressed 24 & 32 bit RGB (alpha channel ignored) - uncompressed 32 bit AYUV (alpha channel ignored) - various YUV 4:2:2 and 4:2:0 compressed formats (i.e., formats with full luminance resolution, but reduced chroma resolution - png or jpeg-encoded individual frames.
    class  BatchConverter
    This plugin implements the File/ /Convert command, which converts the images in a folder to a specified format.
    class  BatchMeasure
    This plugin implements the File/Batch/Measure command, which measures all the images in a user-specified folder.
    class  BatchProcessor
    This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands.
    class  Benchmark
    Implements the Plugins/Utilities/Run Benchmark command.
    class  Binner
    This plugin implements the Image/Transform/Bin command.
    class  BMP_Reader
    This plugin reads BMP files.
    class  BMP_Writer
    Implements the File/Save As/BMP command.
    class  BrowserLauncher
    This plugin implements the File/Import/URL command and the commands in the Help menu that open web pages.
    class  CalibrationBar
    This plugin implements the Analyze/Tools/Calibration Bar command.
    class  CanvasResizer
    This plugin implements the Image/Adjust/Canvas Size command.
    class  ChannelArranger
    This plugin implements the Image/Colors/Arrange Channels command, which allows the user to change the order of channels.
    class  ChannelSplitter
    This plugin implements the Image/Color/Split Channels command.
    class  CircularRoiMaker
    This class implements the Process/FFT/Make Circular Selection command.
    class  ClassChecker
    Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates.
    class  Clipboard
    Copies/pastes images to/from the system clipboard.
    class  Colors
    This plugin implements most of the Edit/Options/Colors command.
    class  CommandFinder  
    class  CommandLister
    This class is used by the Plugins/Shortcuts/List Shortcuts command to display a list keyboard shortcuts.
    class  Commands
    Runs miscellaneous File and Window menu commands.
    class  Compiler
    Compiles and runs plugins using the javac compiler.
    class  CompositeConverter
    This plugin implements the Image/Color/Make Composite command.
    class  Concatenator
    This plugin, which concatenates two or more images or stacks, implements the Image/Stacks/Tools/Concatenate command.
    class  ContrastEnhancer
    Implements ImageJ's Process/Enhance Contrast command.
    class  ControlPanel
    class  Converter
    Implements the conversion commands in the Image/Type submenu.
    class  Coordinates
    The plugin implements the Image/Adjust/Coordinates command.
    class  DICOM
    This plugin decodes DICOM files.
    class  Distribution
    This plugin implements the Analyze/Distribution command.
    class  DragAndDrop
    This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window.
    class  Duplicator
    This plugin implements the Image/Duplicate command.
    class  EventListener
    This plugin implements the Plugins/Utilities/Monitor Events command.
    class  FFT
    This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands in the Process/FFT submenu.
    class  FFTMath
    The class implements the Process/FFT/Math command.
    class  FileInfoVirtualStack
    This plugin opens a multi-page TIFF file, or a set of raw images, as a virtual stack.
    class  Filters3D  
    class  FITS_Reader
    Opens and displays FITS images.
    class  FITS_Writer
    This plugin saves a 16 or 32 bit image in FITS format.
    class  FolderOpener
    Implements the File/Import/Image Sequence command, which opens a folder of images as a stack.
    class  GaussianBlur3D  
    class  GelAnalyzer
    This plugin generates gel profile plots that can be analyzed using the wand tool.
    class  GIF_Reader
    This plugin opens GIFs and Animated GIFs.
    class  GifWriter
    Saves the active image in GIF format, or as an animated GIF if the image is a stack.
    class  Grid
    This class implements the Analyze/Tools/Grid command.
    class  GroupedZProjector
    This plugin implements the Image/Stacks/Tools/Grouped Z Project command.
    class  Histogram
    This plugin implements the Analyze/Histogram command.
    class  Hotkeys
    Implements the Plugins/Hotkeys/Create Shortcut and Remove commands.
    class  HyperStackConverter
    Implements the "Stack to HyperStack", "RGB to HyperStack" and "HyperStack to Stack" commands.
    class  HyperStackMaker
    This plugin implements the File/New/Hyperstack command.
    class  HyperStackReducer
    Implements the Image/HyperStacks/Reduce Dimensionality command.
    class  ImageCalculator
    This plugin implements the Process/Image Calculator command.
    class  ImageInfo
    This plugin implements the Image/Show Info command.
    class  ImageJ_Updater
    This plugin implements the Help/Update ImageJ command.
    class  ImagesToStack
    Implements the Image/Stacks/Images to Stack" command.
    class  JavaProperties
    Displays the Java system properties in a text window.
    class  JavaScriptEvaluator
    Implements the text editor's Macros/Run command, and the IJ.runMacroFile() method, when the file name ends with ".js".
    class  JpegWriter
    The File/Save As/Jpeg command (FileSaver.saveAsJpeg() method) uses this plugin to save images in JPEG format.
    class  ListVirtualStack
    This plugin opens images specified by list of file paths as a virtual stack.
    class  LUT_Editor  
    class  LutLoader
    Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs (256 reds, 256 greens and 256 blues), LUTs in text format, or generates the LUT specified by the string argument passed to the run() method.
    class  Macro_Runner
    This class runs macros and scripts installed in the Plugins menu as well as macros and scripts opened using the Plugins/Macros/Run command.
    class  MacroInstaller
    This plugin implements the Plugins/Macros/Install Macros command.
    class  MeasurementsWriter
    Saves a table as a csv or tab-delimited text file.
    class  Memory
    This plugin implements the Edit/Options/Memory command.
    class  MontageMaker
    Implements the Image/Stacks/Make Montage command.
    class  NewPlugin
    This class creates a new macro or the Java source for a new plugin.
    class  NextImageOpener  
    class  Options
    This plugin implements most of the commands in the Edit/Options sub-menu.
    class  Orthogonal_Views
    This plugin projects dynamically orthogonal XZ and YZ views of a stack.
    class  OverlayCommands
    This plugin implements the commands in the Image/Overlay menu.
    class  OverlayLabels
    This plugin implements the Image/Overlay/Labels command.
    class  PGM_Reader
    This plugin opens PxM format images.
    class  PluginInstaller
    Installs plugins dragged and dropped on the "ImageJ" window, or plugins, macros or scripts opened using the Plugins/Install command.
    class  PlugInInterpreter
    Plugins that run scripts (e.g., BeanShell, Jython) extend this class.
    class  PNG_Writer
    Saves in PNG format using the ImageIO classes.
    class  PNM_Writer  
    class  PointToolOptions
    This plugin implements the Edit/Options/Point Tool command.
    class  Profiler
    Implements the Analyze/Plot Profile and Edit/Options/Profile Plot Options commands.
    class  Projector
    This plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane using nearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest- point projection with either of the other two methods (partial opacity).
    class  ProxySettings
    This plugin implements the Plugins/Utilities/Proxy Settings command.
    class  Raw
    This plugin implements the File/Import/Raw command.
    class  RectToolOptions
    This plugin implements the rounded rectangle tool dialog box.
    class  Resizer
    This plugin implements the Edit/Crop and Image/Adjust/Size commands.
    class  RGBStackConverter
    Converts a 2 or 3 slice stack, or a hyperstack, to RGB.
    class  RGBStackMerge
    This plugin implements the Image/Color/Merge Channels command.
    class  RoiEnlarger
    This plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command.
    class  RoiInterpolator
    This class interpolates between ROIs in the ROI Manager.
    class  RoiReader
    Opens ImageJ, NIH Image and Scion Image for windows ROI outlines.
    class  RoiRotator
    This plugin implements the Edit/Selection/Rotate command.
    class  RoiScaler
    This plugin implements the Edit/Selection/Scale command.
    class  ScaleBar
    This plugin implements the Analyze/Tools/Scale Bar command.
    class  Scaler
    This plugin implements the Image/Scale command.
    class  ScreenGrabber
    This plugin implements the Plugins/Utilities/Capture Screen and Plugins/Utilities/Capture Image commands.
    class  Selection
    This plugin implements the commands in the Edit/Selection submenu.
    class  SimpleCommands
    This plugin implements the Plugins/Utilities/Unlock, Image/Rename and Plugins/Utilities/Search commands.
    class  Slicer
    Implements the Image/Stacks/Reslice command.
    class  SpecifyROI
    This plugin implements the Edit/Selection/Specify command.
    class  Stack_Statistics
    This plugin implements the Image/Stacks/Statistics command.
    class  StackCombiner
    This plugin implements the Image/Stacks/Combine command.
    class  StackEditor
    Implements the AddSlice, DeleteSlice and "Stack to Images" commands.
    class  StackInserter
    This plugin, which implements the Image/Stacks/Tools/Insert command, inserts an image or stack into another image or stack.
    class  StackMaker
    The plugin implements the Image/Stacks/Tools/Montage to Stack command.
    class  StackPlotter  
    class  StackReducer
    This plugin implements the Image/Stacks/Tools/Reduce command.
    class  StackReverser
    This plugin implements the Image/Transform/Flip Z and Image/Stacks/Tools/Reverse commands.
    class  StackWriter
    This plugin, which saves the images in a stack as separate files, implements the File/Save As/Image Sequence command.
    class  Startup
    This plugin implements the Edit/Options/Startup command.
    class  Straightener
    This plugin implements the Edit/Selection/Straighten command.
    class  SubHyperstackMaker
    This plugin is used by the Image/Stacks/Tools/Make Substack command to create substacks of hyperstacks.
    class  SubstackMaker
    This plugin implements the Image/Stacks/Tools/Make Substack command.
    class  SurfacePlotter  
    class  Text
    This plugin implements the Edit/Options/Fonts command and the dialog displayed when you double click on the text tool.
    class  TextFileReader
    This plugin displays the contents of a text file in a window.
    class  TextReader
    This plugin opens a tab or comma delimeted text file as an image.
    class  TextWriter
    This plugin implements the File/Save As/Text command, which saves the contents of Editor windows and TextWindows (e.g., "Log" and "Results").
    class  ThreadLister
    Displays thread information in a text window.
    class  Thresholder
    This plugin implements the Process/Binary/Make Binary and Convert to Mask commands.
    class  URLOpener
    Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL.
    class  WandToolOptions
    This plugin implements the Edit/Options/Wand Tool command.
    class  WindowOrganizer
    This class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands.
    class  XY_Reader
    This plugin implements the File/Import/XY Coordinates command.
    class  XYCoordinates
    Writes the XY coordinates and pixel values of all non-background pixels to a tab-delimited text file.
    class  ZAxisProfiler
    Implements the Image/Stacks/Plot Z-axis Profile command, which plots the selection mean gray value versus slice number.
    class  Zoom
    This plugin implements the commands in the Image/Zoom submenu.
    class  ZProjector
    This plugin performs a z-projection of the input stack.
  • Uses of PlugIn in ij.plugin.frame

    Classes in ij.plugin.frame that implement PlugIn 
    Modifier and Type Class Description
    class  Channels
    Displays the ImageJ Channels window.
    class  ColorPicker
    Implements the Image/Color/Color Picker command.
    class  ColorThresholder
    Selects pixels according to hsb or rgb components.
    class  Commands
    This plugin implements the Plugins>Utiltiees>Recent Commands command.
    class  ContrastAdjuster
    This plugin implements the Brightness/Contrast, Window/level and Color Balance commands, all in the Image/Adjust sub-menu.
    class  Editor
    This is a simple TextArea based editor for editing and compiling plugins.
    class  Fitter
    ImageJ plugin that does curve fitting using the modified CurveFitter class.
    class  LineWidthAdjuster
    Adjusts the width of line selections.
    class  MemoryMonitor
    This plugin continuously plots ImageJ's memory utilization.
    class  PasteController
    Implements ImageJ's Paste Control window.
    class  PlugInDialog
    This is a non-modal dialog that plugins can extend.
    class  PlugInFrame
    This is a closeable window that plugins can extend.
    class  Recorder
    This is ImageJ's macro recorder.
    class  RoiManager
    This plugin implements the Analyze/Tools/ROI Manager command.
    class  SyncWindows
    This class "synchronizes" mouse input in multiple windows.
    class  ThresholdAdjuster
    Adjusts the lower and upper threshold levels of the active image.
  • Uses of PlugIn in ij.plugin.tool

    Classes in ij.plugin.tool that implement PlugIn 
    Modifier and Type Class Description
    class  ArrowTool  
    class  BrushTool
    This class implements the Paintbrush Tool, which allows the user to draw on an image, or on an Overlay if "Paint on overlay" is enabled.
    class  MacroToolRunner  
    class  OverlayBrushTool  
    class  PixelInspectionTool
    This plugin continuously displays the pixel values of the cursor and its surroundings.
    class  PlugInTool  
    class  RoiRotationTool