Author: Chris Nicolai (nicolaitanes at gmail dot com) Date: 2014/2/3 Requirements: ImageJ 1.17y or later (?) Limitations: Source: Measure_Track.java Installation: Copy Measure_Track.class to the plugins folder and restart ImageJ. Description:
This plugin measures the z-profile of the ROI through a stack. For each stack frame, it moves the ROI by the displacement (x[i], y[i]) - (x, y), with x and y taken from selected columns of the Results table. To hold x or y constant, leave the column name blank.
Intended for use with the output of the Tracker plugin. A sample stack is provided. To try it, first load this thresholded stack and run the Tracker plugin, then load the sample stack, select an ROI, and run Measure_Track.
Updated 2/2014 to fix indexing bug: first frame was repeated twice while last frame was skipped.
See Also: Tracker, MultiTracker, Manual Tracking, SpotTracker, MTrack2, ParticleTracker and MTrackJ plugins
|Plugins | Home |